refs/refs/NACHC-fhir-to-omop/src/main/java/org/nachc/tools/omop/yaorma/dvo/SpecimenDvo.java

  1//
  2// Data Value Object (DVO) for SPECIMEN
  3//
  4
  5package org.nachc.tools.omop.yaorma.dvo;
  6
  7import java.util.ArrayList;
  8import java.util.HashMap;
  9import java.util.Date;
 10import java.math.BigDecimal;
 11
 12import org.yaorma.dvo.Dvo;
 13
 14public class SpecimenDvo implements Dvo {
 15
 16    //
 17    // tableName
 18    //
 19    
 20    public static final String TABLE_NAME = "SPECIMEN";
 21    
 22    //
 23    // schemaName
 24    //
 25    
 26    public static final String SCHEMA_NAME = "synthea_micro.dbo";
 27    
 28    //
 29    // columnNames
 30    //
 31    
 32    public static final String[] COLUMN_NAMES = {
 33        "specimen_id",
 34        "person_id",
 35        "specimen_concept_id",
 36        "specimen_type_concept_id",
 37        "specimen_date",
 38        "specimen_datetime",
 39        "quantity",
 40        "unit_concept_id",
 41        "anatomic_site_concept_id",
 42        "disease_status_concept_id",
 43        "specimen_source_id",
 44        "specimen_source_value",
 45        "unit_source_value",
 46        "anatomic_site_source_value",
 47        "disease_status_source_value"
 48    };
 49    
 50    //
 51    // primaryKeyColumnNames
 52    //
 53    
 54    public static final String[] PRIMARY_KEY_COLUMN_NAMES = {
 55    };
 56    
 57    //
 58    // javaNames
 59    //
 60    
 61    public static final String[] JAVA_NAMES = {
 62        "specimenId",
 63        "personId",
 64        "specimenConceptId",
 65        "specimenTypeConceptId",
 66        "specimenDate",
 67        "specimenDatetime",
 68        "quantity",
 69        "unitConceptId",
 70        "anatomicSiteConceptId",
 71        "diseaseStatusConceptId",
 72        "specimenSourceId",
 73        "specimenSourceValue",
 74        "unitSourceValue",
 75        "anatomicSiteSourceValue",
 76        "diseaseStatusSourceValue"
 77    };
 78    
 79    //
 80    // javaNamesProper
 81    //
 82    
 83    public static final String[] JAVA_NAMES_PROPER = {
 84        "SpecimenId",
 85        "PersonId",
 86        "SpecimenConceptId",
 87        "SpecimenTypeConceptId",
 88        "SpecimenDate",
 89        "SpecimenDatetime",
 90        "Quantity",
 91        "UnitConceptId",
 92        "AnatomicSiteConceptId",
 93        "DiseaseStatusConceptId",
 94        "SpecimenSourceId",
 95        "SpecimenSourceValue",
 96        "UnitSourceValue",
 97        "AnatomicSiteSourceValue",
 98        "DiseaseStatusSourceValue"
 99    };
100    
101    
102    //
103    // member variables
104    //
105    
106    private HashMap<String, String> descriptions = new HashMap<String, String>();
107    
108    private Integer specimenId;
109    
110    private Integer personId;
111    
112    private Integer specimenConceptId;
113    
114    private Integer specimenTypeConceptId;
115    
116    private Date specimenDate;
117    
118    private Date specimenDatetime;
119    
120    private BigDecimal quantity;
121    
122    private Integer unitConceptId;
123    
124    private Integer anatomicSiteConceptId;
125    
126    private Integer diseaseStatusConceptId;
127    
128    private String specimenSourceId;
129    
130    private String specimenSourceValue;
131    
132    private String unitSourceValue;
133    
134    private String anatomicSiteSourceValue;
135    
136    private String diseaseStatusSourceValue;
137    
138    //
139    // trivial getters and setters
140    //
141    
142    // specimenId
143    
144    public void setSpecimenId(Integer val) {
145        this.specimenId = val;
146    }
147    
148    public Integer getSpecimenId() {
149        return this.specimenId;
150    }
151    
152    // personId
153    
154    public void setPersonId(Integer val) {
155        this.personId = val;
156    }
157    
158    public Integer getPersonId() {
159        return this.personId;
160    }
161    
162    // specimenConceptId
163    
164    public void setSpecimenConceptId(Integer val) {
165        this.specimenConceptId = val;
166    }
167    
168    public Integer getSpecimenConceptId() {
169        return this.specimenConceptId;
170    }
171    
172    // specimenTypeConceptId
173    
174    public void setSpecimenTypeConceptId(Integer val) {
175        this.specimenTypeConceptId = val;
176    }
177    
178    public Integer getSpecimenTypeConceptId() {
179        return this.specimenTypeConceptId;
180    }
181    
182    // specimenDate
183    
184    public void setSpecimenDate(Date val) {
185        this.specimenDate = val;
186    }
187    
188    public Date getSpecimenDate() {
189        return this.specimenDate;
190    }
191    
192    // specimenDatetime
193    
194    public void setSpecimenDatetime(Date val) {
195        this.specimenDatetime = val;
196    }
197    
198    public Date getSpecimenDatetime() {
199        return this.specimenDatetime;
200    }
201    
202    // quantity
203    
204    public void setQuantity(BigDecimal val) {
205        this.quantity = val;
206    }
207    
208    public BigDecimal getQuantity() {
209        return this.quantity;
210    }
211    
212    // unitConceptId
213    
214    public void setUnitConceptId(Integer val) {
215        this.unitConceptId = val;
216    }
217    
218    public Integer getUnitConceptId() {
219        return this.unitConceptId;
220    }
221    
222    // anatomicSiteConceptId
223    
224    public void setAnatomicSiteConceptId(Integer val) {
225        this.anatomicSiteConceptId = val;
226    }
227    
228    public Integer getAnatomicSiteConceptId() {
229        return this.anatomicSiteConceptId;
230    }
231    
232    // diseaseStatusConceptId
233    
234    public void setDiseaseStatusConceptId(Integer val) {
235        this.diseaseStatusConceptId = val;
236    }
237    
238    public Integer getDiseaseStatusConceptId() {
239        return this.diseaseStatusConceptId;
240    }
241    
242    // specimenSourceId
243    
244    public void setSpecimenSourceId(String val) {
245        this.specimenSourceId = val;
246    }
247    
248    public String getSpecimenSourceId() {
249        return this.specimenSourceId;
250    }
251    
252    // specimenSourceValue
253    
254    public void setSpecimenSourceValue(String val) {
255        this.specimenSourceValue = val;
256    }
257    
258    public String getSpecimenSourceValue() {
259        return this.specimenSourceValue;
260    }
261    
262    // unitSourceValue
263    
264    public void setUnitSourceValue(String val) {
265        this.unitSourceValue = val;
266    }
267    
268    public String getUnitSourceValue() {
269        return this.unitSourceValue;
270    }
271    
272    // anatomicSiteSourceValue
273    
274    public void setAnatomicSiteSourceValue(String val) {
275        this.anatomicSiteSourceValue = val;
276    }
277    
278    public String getAnatomicSiteSourceValue() {
279        return this.anatomicSiteSourceValue;
280    }
281    
282    // diseaseStatusSourceValue
283    
284    public void setDiseaseStatusSourceValue(String val) {
285        this.diseaseStatusSourceValue = val;
286    }
287    
288    public String getDiseaseStatusSourceValue() {
289        return this.diseaseStatusSourceValue;
290    }
291    
292    //
293    // implementation of Dvo
294    //
295    
296    public String getTableName() {
297        return TABLE_NAME;
298    };
299    
300    public String getSchemaName() {
301        return org.nachc.tools.fhirtoomop.util.params.AppParams.getFullySpecifiedCdmSchemaName();
302    };
303    
304    public String[] getColumnNames() {
305        return COLUMN_NAMES;
306    };
307    
308    public String[] getPrimaryKeyColumnNames() {
309        return PRIMARY_KEY_COLUMN_NAMES;
310    };
311    
312    public String[] getJavaNames() {
313        return JAVA_NAMES;
314    };
315    
316    public String[] getJavaNamesProper() {
317        return JAVA_NAMES_PROPER;
318    };
319    
320    public void setDescriptions(HashMap<String, String> descriptions) {
321        this.descriptions = descriptions;
322    }
323    
324    public HashMap<String, String> getDescriptions() {
325        return this.descriptions;
326    }
327    
328    public void addDescription(String javaName, String value) {
329        this.descriptions.put(javaName, value);
330    }
331    
332    public String getDescription(String javaName) {
333        return this.descriptions.get(javaName);
334    }
335    
336    public String[] getPrimaryKeyValues() {
337        String[] rtn = new String[] {
338        };
339        return rtn;
340    }
341}
342