profiles / ValueSet

OMOP Measurement-domain codes (example subset)

omop-measurement-codes OMOP domain: Measurement 2 includes

Codes that route a FHIR Observation to the OMOP `measurement` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'. The compose below lists illustrative examples only — the real expansion comes from the loaded Athena vocabularies (~94,791 standard concepts).

compose.include

include · LOINC
vocab: LOINCloaded ✓ 5 codes
http://loinc.org
Code Display
4548-4 Hemoglobin A1c/Hemoglobin.total in Blood
8867-4 Heart rate
8480-6 Systolic blood pressure
8462-4 Diastolic blood pressure
718-7 Hemoglobin [Mass/volume] in Blood
include · SNOMED CT
vocab: SNOMEDloaded ✓ 2 codes
http://snomed.info/sct
Code Display
271649006 Systolic blood pressure
271650006 Diastolic blood pressure
Authoritative expansion (run against the loaded Athena vocab)
SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'
Raw JSON
{
  "resourceType": "ValueSet",
  "id": "omop-measurement-codes",
  "url": "https://fhir2omop.health-samurai.io/ValueSet/omop-measurement-codes",
  "version": "0.1.0",
  "name": "OmopMeasurementCodes",
  "title": "OMOP Measurement-domain codes (example subset)",
  "status": "draft",
  "experimental": true,
  "description": "Codes that route a FHIR Observation to the OMOP `measurement` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'. The compose below lists illustrative examples only — the real expansion comes from the loaded Athena vocabularies (~94,791 standard concepts).",
  "extension": [
    {
      "url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-domain",
      "valueString": "Measurement"
    },
    {
      "url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-expansion-sql",
      "valueString": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'"
    }
  ],
  "compose": {
    "include": [
      {
        "system": "http://loinc.org",
        "concept": [
          {
            "code": "4548-4",
            "display": "Hemoglobin A1c/Hemoglobin.total in Blood"
          },
          {
            "code": "8867-4",
            "display": "Heart rate"
          },
          {
            "code": "8480-6",
            "display": "Systolic blood pressure"
          },
          {
            "code": "8462-4",
            "display": "Diastolic blood pressure"
          },
          {
            "code": "718-7",
            "display": "Hemoglobin [Mass/volume] in Blood"
          }
        ]
      },
      {
        "system": "http://snomed.info/sct",
        "concept": [
          {
            "code": "271649006",
            "display": "Systolic blood pressure"
          },
          {
            "code": "271650006",
            "display": "Diastolic blood pressure"
          }
        ]
      }
    ]
  },
  "domain": "Measurement",
  "expansionSql": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'"
}