profiles / ValueSet
OMOP Measurement-domain codes (example subset)
omop-measurement-codes
OMOP domain: Measurement
2 includes
Codes that route a FHIR Observation to the OMOP `measurement` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'. The compose below lists illustrative examples only — the real expansion comes from the loaded Athena vocabularies (~94,791 standard concepts).
compose.include
include
·
LOINC
vocab: LOINCloaded ✓
5 codes
http://loinc.org
| Code | Display |
|---|---|
| 4548-4 | Hemoglobin A1c/Hemoglobin.total in Blood |
| 8867-4 | Heart rate |
| 8480-6 | Systolic blood pressure |
| 8462-4 | Diastolic blood pressure |
| 718-7 | Hemoglobin [Mass/volume] in Blood |
include
·
SNOMED CT
vocab: SNOMEDloaded ✓
2 codes
http://snomed.info/sct
| Code | Display |
|---|---|
| 271649006 | Systolic blood pressure |
| 271650006 | Diastolic blood pressure |
Authoritative expansion (run against the loaded Athena vocab)
SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'
Raw JSON
{
"resourceType": "ValueSet",
"id": "omop-measurement-codes",
"url": "https://fhir2omop.health-samurai.io/ValueSet/omop-measurement-codes",
"version": "0.1.0",
"name": "OmopMeasurementCodes",
"title": "OMOP Measurement-domain codes (example subset)",
"status": "draft",
"experimental": true,
"description": "Codes that route a FHIR Observation to the OMOP `measurement` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'. The compose below lists illustrative examples only — the real expansion comes from the loaded Athena vocabularies (~94,791 standard concepts).",
"extension": [
{
"url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-domain",
"valueString": "Measurement"
},
{
"url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-expansion-sql",
"valueString": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'"
}
],
"compose": {
"include": [
{
"system": "http://loinc.org",
"concept": [
{
"code": "4548-4",
"display": "Hemoglobin A1c/Hemoglobin.total in Blood"
},
{
"code": "8867-4",
"display": "Heart rate"
},
{
"code": "8480-6",
"display": "Systolic blood pressure"
},
{
"code": "8462-4",
"display": "Diastolic blood pressure"
},
{
"code": "718-7",
"display": "Hemoglobin [Mass/volume] in Blood"
}
]
},
{
"system": "http://snomed.info/sct",
"concept": [
{
"code": "271649006",
"display": "Systolic blood pressure"
},
{
"code": "271650006",
"display": "Diastolic blood pressure"
}
]
}
]
},
"domain": "Measurement",
"expansionSql": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Measurement' AND standard_concept = 'S'"
}