profiles / ValueSet
OMOP Device-domain codes (example subset)
omop-device-codes
OMOP domain: Device
1 include
Codes that route a FHIR Device (with DeviceUseStatement) or Procedure.usedCode to the OMOP `device_exposure` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Device' AND standard_concept = 'S'. SNOMED is the dominant source vocabulary for device concepts.
compose.include
include
·
SNOMED CT
vocab: SNOMEDloaded ✓
6 codes
http://snomed.info/sct
| Code | Display |
|---|---|
| 14106009 | Cardiac pacemaker |
| 706004007 | Implantable cardiac pacemaker |
| 705643001 | Coronary artery stent |
| 20568009 | Urinary catheter |
| 360099004 | Tracheostomy tube |
| 69805005 | Insulin pump |
Authoritative expansion (run against the loaded Athena vocab)
SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Device' AND standard_concept = 'S'
Raw JSON
{
"resourceType": "ValueSet",
"id": "omop-device-codes",
"url": "https://fhir2omop.health-samurai.io/ValueSet/omop-device-codes",
"version": "0.1.0",
"name": "OmopDeviceCodes",
"title": "OMOP Device-domain codes (example subset)",
"status": "draft",
"experimental": true,
"description": "Codes that route a FHIR Device (with DeviceUseStatement) or Procedure.usedCode to the OMOP `device_exposure` table. Authoritative expansion: vocab.concept WHERE domain_id = 'Device' AND standard_concept = 'S'. SNOMED is the dominant source vocabulary for device concepts.",
"extension": [
{
"url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-domain",
"valueString": "Device"
},
{
"url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-expansion-sql",
"valueString": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Device' AND standard_concept = 'S'"
}
],
"compose": {
"include": [
{
"system": "http://snomed.info/sct",
"concept": [
{
"code": "14106009",
"display": "Cardiac pacemaker"
},
{
"code": "706004007",
"display": "Implantable cardiac pacemaker"
},
{
"code": "705643001",
"display": "Coronary artery stent"
},
{
"code": "20568009",
"display": "Urinary catheter"
},
{
"code": "360099004",
"display": "Tracheostomy tube"
},
{
"code": "69805005",
"display": "Insulin pump"
}
]
}
]
},
"domain": "Device",
"expansionSql": "SELECT vocabulary_id, concept_code, concept_name FROM vocab.concept WHERE domain_id = 'Device' AND standard_concept = 'S'"
}