profiles / StructureDefinition

OMOP-Convertible Condition → condition_occurrence

Condition →condition_occurrence edge mapspec

FHIR Condition that can be converted to OMOP `condition_occurrence`. Excludes entered-in-error; requires a subject, onset, and a code in the OMOP Condition domain.

Routing key — code binding

omop-condition-codes OMOP domain: Condition

If Condition.code resolves to a concept in this ValueSet, the resource converts to condition_occurrence.

Path	Card	Type	Binding / Fixed	Comment
Condition.verificationStatus			fhir/condition-ver-status required
Condition.code	1..* MS		omop-condition-codes required
Condition.subject	1..*	Reference
Condition.onset[x]	1..* MS			Required for condition_occurrence.condition_start_date.

Raw JSON

{
  "resourceType": "StructureDefinition",
  "id": "omop-condition",
  "url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-condition",
  "version": "0.1.0",
  "name": "OmopCondition",
  "title": "OMOP-Convertible Condition → condition_occurrence",
  "status": "draft",
  "experimental": true,
  "description": "FHIR Condition that can be converted to OMOP `condition_occurrence`. Excludes entered-in-error; requires a subject, onset, and a code in the OMOP Condition domain.",
  "fhirVersion": "4.0.1",
  "kind": "resource",
  "abstract": false,
  "type": "Condition",
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Condition",
  "derivation": "constraint",
  "extension": [
    {
      "url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-target-table",
      "valueString": "condition_occurrence"
    },
    {
      "url": "https://fhir2omop.health-samurai.io/StructureDefinition/omop-edge",
      "valueString": "Condition__condition_occurrence"
    }
  ],
  "differential": {
    "element": [
      {
        "id": "Condition.verificationStatus",
        "path": "Condition.verificationStatus",
        "binding": {
          "strength": "required",
          "valueSet": "http://hl7.org/fhir/ValueSet/condition-ver-status",
          "description": "Must not be entered-in-error."
        }
      },
      {
        "id": "Condition.code",
        "path": "Condition.code",
        "min": 1,
        "mustSupport": true,
        "binding": {
          "strength": "required",
          "valueSet": "https://fhir2omop.health-samurai.io/ValueSet/omop-condition-codes",
          "description": "SNOMED Condition or a source code (ICD10CM/ICD9CM) that maps to OMOP Condition via concept_relationship 'Maps to'."
        }
      },
      {
        "id": "Condition.subject",
        "path": "Condition.subject",
        "min": 1,
        "type": [
          {
            "code": "Reference",
            "targetProfile": [
              "http://hl7.org/fhir/StructureDefinition/Patient"
            ]
          }
        ]
      },
      {
        "id": "Condition.onset[x]",
        "path": "Condition.onset[x]",
        "min": 1,
        "mustSupport": true,
        "comment": "Required for condition_occurrence.condition_start_date."
      }
    ]
  },
  "targetTable": "condition_occurrence",
  "edgeKey": "Condition__condition_occurrence"
}